Monophyletic blowflies revealed by phylogenomics

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Monophyletic blowflies revealed by phylogenomics. / Yan, Liping; Pape, Thomas; Meusemann, Karen; Kutty, Sujatha Narayanan; Meier, Rudolf; Bayless, Keith M.; Zhang, Dong.

In: BMC Biology, Vol. 19, 230, 2021.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Yan, L, Pape, T, Meusemann, K, Kutty, SN, Meier, R, Bayless, KM & Zhang, D 2021, 'Monophyletic blowflies revealed by phylogenomics', BMC Biology, vol. 19, 230. https://doi.org/10.1186/s12915-021-01156-4

APA

Yan, L., Pape, T., Meusemann, K., Kutty, S. N., Meier, R., Bayless, K. M., & Zhang, D. (2021). Monophyletic blowflies revealed by phylogenomics. BMC Biology, 19, [230]. https://doi.org/10.1186/s12915-021-01156-4

Vancouver

Yan L, Pape T, Meusemann K, Kutty SN, Meier R, Bayless KM et al. Monophyletic blowflies revealed by phylogenomics. BMC Biology. 2021;19. 230. https://doi.org/10.1186/s12915-021-01156-4

Author

Yan, Liping ; Pape, Thomas ; Meusemann, Karen ; Kutty, Sujatha Narayanan ; Meier, Rudolf ; Bayless, Keith M. ; Zhang, Dong. / Monophyletic blowflies revealed by phylogenomics. In: BMC Biology. 2021 ; Vol. 19.

Bibtex

@article{b52c9fa9e4074acb8a6eb1ca04f52857,
title = "Monophyletic blowflies revealed by phylogenomics",
abstract = "Background: Blowflies are ubiquitous insects, often shiny and metallic, and the larvae of many species provide important ecosystem services (e.g., recycling carrion) and are used in forensics and debridement therapy. Yet, the taxon has repeatedly been recovered to be para- or polyphyletic, and the lack of a well-corroborated phylogeny has prevented a robust classification. Results: We here resolve the relationships between the different blowfly subclades by including all recognized subfamilies in a phylogenomic analysis using 2221 single-copy nuclear protein-coding genes of Diptera. Maximum likelihood (ML), maximum parsimony (MP), and coalescent-based phylogeny reconstructions all support the same relationships for the full data set. Based on this backbone phylogeny, blowflies are redefined as the most inclusive monophylum within the superfamily Oestroidea not containing Mesembrinellidae, Mystacinobiidae, Oestridae, Polleniidae, Sarcophagidae, Tachinidae, and Ulurumyiidae. The constituent subfamilies are re-classified as Ameniinae (including the Helicoboscinae, syn. nov.), Bengaliinae, Calliphorinae (including Aphyssurinae, syn. nov., Melanomyinae, syn. nov., and Toxotarsinae, syn. nov.), Chrysomyinae, Luciliinae, Phumosiinae, Rhiniinae stat. rev., and Rhinophorinae stat. rev. Metallic coloration in the adult is shown to be widespread but does not emerge as the most likely ground plan feature. Conclusions: Our study provides the first phylogeny of oestroid calyptrates including all blowfly subfamilies. This allows settling a long-lasting controversy in Diptera by redefining blowflies as a well-supported monophylum, and blowfly classification is adjusted accordingly. The archetypical blowfly trait of carrion-feeding maggots most likely evolved twice, and the metallic color may not belong to the blowfly ground plan.",
keywords = "Calyptratae, Coloration, Genome, Phylogeny, Transcriptome",
author = "Liping Yan and Thomas Pape and Karen Meusemann and Kutty, {Sujatha Narayanan} and Rudolf Meier and Bayless, {Keith M.} and Dong Zhang",
note = "Publisher Copyright: {\textcopyright} 2021, The Author(s).",
year = "2021",
doi = "10.1186/s12915-021-01156-4",
language = "English",
volume = "19",
journal = "B M C Biology",
issn = "1741-7007",
publisher = "BioMed Central Ltd.",

}

RIS

TY - JOUR

T1 - Monophyletic blowflies revealed by phylogenomics

AU - Yan, Liping

AU - Pape, Thomas

AU - Meusemann, Karen

AU - Kutty, Sujatha Narayanan

AU - Meier, Rudolf

AU - Bayless, Keith M.

AU - Zhang, Dong

N1 - Publisher Copyright: © 2021, The Author(s).

PY - 2021

Y1 - 2021

N2 - Background: Blowflies are ubiquitous insects, often shiny and metallic, and the larvae of many species provide important ecosystem services (e.g., recycling carrion) and are used in forensics and debridement therapy. Yet, the taxon has repeatedly been recovered to be para- or polyphyletic, and the lack of a well-corroborated phylogeny has prevented a robust classification. Results: We here resolve the relationships between the different blowfly subclades by including all recognized subfamilies in a phylogenomic analysis using 2221 single-copy nuclear protein-coding genes of Diptera. Maximum likelihood (ML), maximum parsimony (MP), and coalescent-based phylogeny reconstructions all support the same relationships for the full data set. Based on this backbone phylogeny, blowflies are redefined as the most inclusive monophylum within the superfamily Oestroidea not containing Mesembrinellidae, Mystacinobiidae, Oestridae, Polleniidae, Sarcophagidae, Tachinidae, and Ulurumyiidae. The constituent subfamilies are re-classified as Ameniinae (including the Helicoboscinae, syn. nov.), Bengaliinae, Calliphorinae (including Aphyssurinae, syn. nov., Melanomyinae, syn. nov., and Toxotarsinae, syn. nov.), Chrysomyinae, Luciliinae, Phumosiinae, Rhiniinae stat. rev., and Rhinophorinae stat. rev. Metallic coloration in the adult is shown to be widespread but does not emerge as the most likely ground plan feature. Conclusions: Our study provides the first phylogeny of oestroid calyptrates including all blowfly subfamilies. This allows settling a long-lasting controversy in Diptera by redefining blowflies as a well-supported monophylum, and blowfly classification is adjusted accordingly. The archetypical blowfly trait of carrion-feeding maggots most likely evolved twice, and the metallic color may not belong to the blowfly ground plan.

AB - Background: Blowflies are ubiquitous insects, often shiny and metallic, and the larvae of many species provide important ecosystem services (e.g., recycling carrion) and are used in forensics and debridement therapy. Yet, the taxon has repeatedly been recovered to be para- or polyphyletic, and the lack of a well-corroborated phylogeny has prevented a robust classification. Results: We here resolve the relationships between the different blowfly subclades by including all recognized subfamilies in a phylogenomic analysis using 2221 single-copy nuclear protein-coding genes of Diptera. Maximum likelihood (ML), maximum parsimony (MP), and coalescent-based phylogeny reconstructions all support the same relationships for the full data set. Based on this backbone phylogeny, blowflies are redefined as the most inclusive monophylum within the superfamily Oestroidea not containing Mesembrinellidae, Mystacinobiidae, Oestridae, Polleniidae, Sarcophagidae, Tachinidae, and Ulurumyiidae. The constituent subfamilies are re-classified as Ameniinae (including the Helicoboscinae, syn. nov.), Bengaliinae, Calliphorinae (including Aphyssurinae, syn. nov., Melanomyinae, syn. nov., and Toxotarsinae, syn. nov.), Chrysomyinae, Luciliinae, Phumosiinae, Rhiniinae stat. rev., and Rhinophorinae stat. rev. Metallic coloration in the adult is shown to be widespread but does not emerge as the most likely ground plan feature. Conclusions: Our study provides the first phylogeny of oestroid calyptrates including all blowfly subfamilies. This allows settling a long-lasting controversy in Diptera by redefining blowflies as a well-supported monophylum, and blowfly classification is adjusted accordingly. The archetypical blowfly trait of carrion-feeding maggots most likely evolved twice, and the metallic color may not belong to the blowfly ground plan.

KW - Calyptratae

KW - Coloration

KW - Genome

KW - Phylogeny

KW - Transcriptome

U2 - 10.1186/s12915-021-01156-4

DO - 10.1186/s12915-021-01156-4

M3 - Journal article

C2 - 34706743

AN - SCOPUS:85117884346

VL - 19

JO - B M C Biology

JF - B M C Biology

SN - 1741-7007

M1 - 230

ER -

ID: 285243350