Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae)

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Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae). / Salmaki, Yasaman; Zarre, Shahin; Ryding, Olof; Lindqvist, Charlotte; Bräuchler, Christian; Heubl, Günther; Barber, Janet; Bendiksby, Mika.

In: Molecular Phylogenetics and Evolution, Vol. 69, No. 3, 01.12.2013, p. 535-551.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Salmaki, Y, Zarre, S, Ryding, O, Lindqvist, C, Bräuchler, C, Heubl, G, Barber, J & Bendiksby, M 2013, 'Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae)', Molecular Phylogenetics and Evolution, vol. 69, no. 3, pp. 535-551. https://doi.org/10.1016/j.ympev.2013.07.024

APA

Salmaki, Y., Zarre, S., Ryding, O., Lindqvist, C., Bräuchler, C., Heubl, G., Barber, J., & Bendiksby, M. (2013). Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae). Molecular Phylogenetics and Evolution, 69(3), 535-551. https://doi.org/10.1016/j.ympev.2013.07.024

Vancouver

Salmaki Y, Zarre S, Ryding O, Lindqvist C, Bräuchler C, Heubl G et al. Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae). Molecular Phylogenetics and Evolution. 2013 Dec 1;69(3):535-551. https://doi.org/10.1016/j.ympev.2013.07.024

Author

Salmaki, Yasaman ; Zarre, Shahin ; Ryding, Olof ; Lindqvist, Charlotte ; Bräuchler, Christian ; Heubl, Günther ; Barber, Janet ; Bendiksby, Mika. / Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae). In: Molecular Phylogenetics and Evolution. 2013 ; Vol. 69, No. 3. pp. 535-551.

Bibtex

@article{7a4819fd349940bdbcf91d0da5b166b2,
title = "Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae)",
abstract = "Although tribe Stachydeae (Lamiaceae) is considered monophyletic, relationships within the tribe are still poorly understood. The complexity of Stachydeae includes paraphyletic genera, considerable morphological plasticity, a range of ploidy levels, and presumably frequent natural hybridization. We performed parsimony and Bayesian phylogenetic analyses of nuclear (ribosomal ITS) and plastid (trnL intron, trnL-trnF spacer, rps16 intron) DNA sequence data from a taxonomically and geographically broad sampling of the tribe to identify major evolutionary lineages and to test taxonomic hypotheses within this largest of all lamioid tribes. We included 143 accessions corresponding to 121 species, representing both Old and New World species, and all 12 recognized genera of tribe Stachydeae. Both nuclear and plastid data corroborate monophyly of the tribe, with Melittis as sister to all remaining Stachydeae. For the latter well-supported clade, we suggest the phylogenetic name Eurystachys. Within Eurystachys, although monophyly is supported by both nuclear and plastid data for several named and unnamed groups, the majority of recognized taxa appear to be para- or polyphyletic. The taxon compositions of most subclades are congruent between the plastid and nuclear tree topologies, whereas their relative phylogenetic placements are often not. This level of plastid-nuclear incongruence suggests considerable impact of hybridization in the evolution of Stachydeae. (C) 2013 Elsevier Inc. All rights reserved.",
keywords = "Eurystachys, Incongruence, Paraphyly, Plastid DNA, nrITS, Stachys",
author = "Yasaman Salmaki and Shahin Zarre and Olof Ryding and Charlotte Lindqvist and Christian Br{\"a}uchler and G{\"u}nther Heubl and Janet Barber and Mika Bendiksby",
year = "2013",
month = dec,
day = "1",
doi = "10.1016/j.ympev.2013.07.024",
language = "English",
volume = "69",
pages = "535--551",
journal = "Molecular Phylogenetics and Evolution",
issn = "1055-7903",
publisher = "Academic Press",
number = "3",

}

RIS

TY - JOUR

T1 - Molecular phylogeny of tribe Stachydeae (Lamiaceae subfamily Lamioideae)

AU - Salmaki, Yasaman

AU - Zarre, Shahin

AU - Ryding, Olof

AU - Lindqvist, Charlotte

AU - Bräuchler, Christian

AU - Heubl, Günther

AU - Barber, Janet

AU - Bendiksby, Mika

PY - 2013/12/1

Y1 - 2013/12/1

N2 - Although tribe Stachydeae (Lamiaceae) is considered monophyletic, relationships within the tribe are still poorly understood. The complexity of Stachydeae includes paraphyletic genera, considerable morphological plasticity, a range of ploidy levels, and presumably frequent natural hybridization. We performed parsimony and Bayesian phylogenetic analyses of nuclear (ribosomal ITS) and plastid (trnL intron, trnL-trnF spacer, rps16 intron) DNA sequence data from a taxonomically and geographically broad sampling of the tribe to identify major evolutionary lineages and to test taxonomic hypotheses within this largest of all lamioid tribes. We included 143 accessions corresponding to 121 species, representing both Old and New World species, and all 12 recognized genera of tribe Stachydeae. Both nuclear and plastid data corroborate monophyly of the tribe, with Melittis as sister to all remaining Stachydeae. For the latter well-supported clade, we suggest the phylogenetic name Eurystachys. Within Eurystachys, although monophyly is supported by both nuclear and plastid data for several named and unnamed groups, the majority of recognized taxa appear to be para- or polyphyletic. The taxon compositions of most subclades are congruent between the plastid and nuclear tree topologies, whereas their relative phylogenetic placements are often not. This level of plastid-nuclear incongruence suggests considerable impact of hybridization in the evolution of Stachydeae. (C) 2013 Elsevier Inc. All rights reserved.

AB - Although tribe Stachydeae (Lamiaceae) is considered monophyletic, relationships within the tribe are still poorly understood. The complexity of Stachydeae includes paraphyletic genera, considerable morphological plasticity, a range of ploidy levels, and presumably frequent natural hybridization. We performed parsimony and Bayesian phylogenetic analyses of nuclear (ribosomal ITS) and plastid (trnL intron, trnL-trnF spacer, rps16 intron) DNA sequence data from a taxonomically and geographically broad sampling of the tribe to identify major evolutionary lineages and to test taxonomic hypotheses within this largest of all lamioid tribes. We included 143 accessions corresponding to 121 species, representing both Old and New World species, and all 12 recognized genera of tribe Stachydeae. Both nuclear and plastid data corroborate monophyly of the tribe, with Melittis as sister to all remaining Stachydeae. For the latter well-supported clade, we suggest the phylogenetic name Eurystachys. Within Eurystachys, although monophyly is supported by both nuclear and plastid data for several named and unnamed groups, the majority of recognized taxa appear to be para- or polyphyletic. The taxon compositions of most subclades are congruent between the plastid and nuclear tree topologies, whereas their relative phylogenetic placements are often not. This level of plastid-nuclear incongruence suggests considerable impact of hybridization in the evolution of Stachydeae. (C) 2013 Elsevier Inc. All rights reserved.

KW - Eurystachys

KW - Incongruence

KW - Paraphyly

KW - Plastid DNA

KW - nrITS

KW - Stachys

U2 - 10.1016/j.ympev.2013.07.024

DO - 10.1016/j.ympev.2013.07.024

M3 - Journal article

C2 - 23916621

VL - 69

SP - 535

EP - 551

JO - Molecular Phylogenetics and Evolution

JF - Molecular Phylogenetics and Evolution

SN - 1055-7903

IS - 3

ER -

ID: 119411098